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Resource List

Arabidopsis thaliana Arabidopsis thaliana
Brachypodium Brachypodium distachyon
populus Populus nigra
oryza Oryza sativa
lotus Lotus japonicus
lycopersicom Lycopersicon esculentum Mill
striga Striga hermonthica
nicotiana Nicotiana tabacum
(BY-2 cell)
brassica Brassica rapa
thellungiella Thellungiella halophila
physcomitrella Physcomitrella patens
manihot Manihot esculenta Crantz

Set of Arabidopsis natural accessions

This resource is made up of selected 100 natural accessions of Arabidopsis in RIKEN BRC stock.

The 100 lines were selected as the following way.

  1. We propagated natural accessions with single seed descent (SSD) method, and obtained 149 SNPs data from the 3rd generation of each accession. Then we classified the accessions into 100 groups by the SNPs data.
  2. We selected one accession from each group. Phenotype data obtained in RIKEN BRC is considered in the selection process.

Please note:

  • Users will receive a package with 100 tubes. Each tube contains approx. 50 seeds of natural accessions.
  • In order to conserve the polymorphisms in each accession, original seed stocks (those before amplified with the SSD method) were used for distribution.
  • List of accessions in the set is here.
  • User’s fee for non-profit organization is 118,000 JPY. (Entire list of fees is here.)

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