Resource List

Arabidopsis thaliana Arabidopsis thaliana
Brachypodium Brachypodium distachyon
populus Populus nigra
oryza Oryza sativa
lotus Lotus japonicus
lycopersicom Lycopersicon esculentum Mill
striga Striga hermonthica
nicotiana Nicotiana tabacum
(BY-2 cell)
brassica Brassica rapa
thellungiella Thellungiella halophila
physcomitrella Physcomitrella patens
manihot Manihot esculenta Crantz

Individual lines (mutants and transgenic lines)

This is a list of mutant and transgenic lines of Arabidopsis. Please find detail information in the manuscript published by the depositor. If you have questions, please mail to plant@brc.riken.jp.

IMPORTANT NOTE:

(1)Some of the lines are categorized to genetically modified organisms. For ordering such materials, the applicants must obtain all of the permission required by any kind of regulation or law before ordering. Also, it is recipient’s responsibility to perform customs procedure for importation of biological materials. Please inform us when you need quarantine certification to import Arabidopsis seeds. Without providing such information, RIKEN BRC cannot guarantee any loss or damage of the materials that is caused during customs procedure.

(2)Transgenic lines are usually the mixture of homozygous and heterozygous seeds. Also some seeds have more than one copy of transgene. In some case, expression level of transgene is suppressed by co-suppression. Please consider these possibilities when you use the seeds.

 

Resource number
Line number
Depositor/Developer
Phynotype
AGI code
Method for establishment
GMO
PubMed ID
Zygosity
Background
Comment
psi00001iso-1DRIKEN GSC (Dr. Matsui/Dr. Nakazawa)DwarfAt1g65620Activation taggingYes12787254HeterozygousColIsolated from Activation-tagged line
psi00002iso-2DRIKEN GSC (Dr. Matsui/Dr. Nakazawa)DwarfAt1g65620Activation taggingYes12787254HeterozygousColIsolated from Activation-tagged line
psi00004iso-4DRIKEN GSC (Dr. Matsui/Dr. Nakazawa)DwarfAt5g66870Activation taggingYes12787254HeterozygousColIsolated from Activation-tagged line
psi00005ydk1-DRIKEN GSC (Dr. Matsui/Dr. Nakazawa)DwarfAt4g37390Activation taggingYes14756757HeterozygousColIsolated from Activation-tagged line
psi00006lsh1-DRIKEN GSC (Dr. Matsui/Dr. Nakazawa)Reduced elongation of hypocotylAt5g28490Activation taggingYes14871309HeterozygousColIsolated from Activation-tagged line
psi00007DFL2OXRIKEN GSC (Dr. Matsui/Dr. Nakazawa)Reduced elongation of hypocotylAt4g03400Over expressionYes14581632HeterozygousCol
psi00008DFL2ASRIKEN GSC (Dr. Matsui/Dr. Nakazawa)Reduced elongation of hypocotylAt4g03400Anti-senseYes14581632HeterozygousCol
psi00009pDFL2::GUSRIKEN GSC (Dr. Matsui/Dr. Nakazawa)GUS expression at hypocotylAt4g03400Transformation with GUSYes14581632HeterozygousCol
psi00010pCPC::CPC:GFPRIKEN PSC (Dr. Wada)GFP expression at epidermal cellAt2g46410Transformation with GFPYes12403712HomozygousColThe GFP sequence in this line is highly homologous with the synthetic GFP that contains S65T mutation.
psi00011stop1RIKEN BRC (Dr. Iuch)Senstive to acid/Al stressAt1g34370EMSNo17535918HomozygousCol
psi00012stop1-KORIKEN BRC (Dr. Iuch)Senstive to acid/Al stressAt1g34370T-DNA insertionYes17535918HomozygousColSALK_114108
psi00013stop1-compRIKEN BRC (Dr. Iuch)Senstive to acid/Al stress (complement line)At1g34370Compliment line of stop1Yes17535918N/ACol
psi00014gid1 AabbccRIKEN BRC (Dr. Iuch)Sever dwarf (if homozygous) At3g05120(GID1a)   At3g63010(GID1b)   At5g27320(GID1c)CrossigYes17521411HeterozygousCol/NossenEstablished by crossing gid1 a-1 gid1 b-1 with gid1 c-1 to produce Aabbcc genotype. The aabbcc seeds in this stock show lower germination ratio than Aabbcc seeds.
psi00015gid1 bc (AAbbcc)RIKEN BRC (Dr. Iuch)Mostly normal At3g63010(GID1b)   At5g27320(GID1c)CrossingYes17521411HomozygousCol/NossenEstablished by crossing gid1 b-1 with gid1 c-1.
psi00016gid1 ac (aaBBcc)RIKEN BRC (Dr. Iuch)Dwarf At3g05120(GID1a)   At5g27320(GID1c)CrossingYes17521411HomozygousColEstablished by crossing gid1 a-2 with gid1 c-1, low germination rate.
psi00017gid1 ab (aabbCC)RIKEN BRC (Dr. Iuch)Low fertility At3g05120(GID1a)   At3g63010(GID1b)CrossingYes17521411HomozygousNossenEstablished by crossing gid1 a-1 with gid1 b-1.
psi00018gid1 a-1 (aaBBCC)RIKEN BRC (Dr. Iuch)None At3g05120(GID1a)Ds insertionYes17521411HomozygousNossen13-1770-1
psi00019gid1 a-2 (aaBBCC)RIKEN BRC (Dr. Iuch)None At3g05120(GID1a)T-DNA insertionYes17521411HomozygousColSALK_044317
psi00020gid1 b-1 (AAbbCC)RIKEN BRC (Dr. Iuch)None At3g63010(GID1b)Ds insertionYes17521411HomozygousNossen11-3970-1
psi00021gid1 c-1 (AABBcc)RIKEN BRC (Dr. Iuch)None At5g27320(GID1c)T-DNA insertionYes17521411HomozygousColSALK_023529
psi00022srd2-1Tokyo Univ. (Dr. Sugiyama)Temperature sensitive At1g28560EMSNo12232244  9389671  16098103  18064403  20965997HomozygousLer
psi00023rid3Tokyo Univ. (Dr. Sugiyama)Temperature sensitive At3g49180EMSNo14522871  19054368HomozygousLer
psi00024rid5Tokyo Univ. (Dr. Sugiyama)Temperature sensitive At2g35630EMSNo14522871HomozygousLer
psi00025rpd1-1Tokyo Univ. (Dr. Sugiyama)Temperature sensitive At4g33495EMSNo14522871  16407439HomozygousLer
psi00026rpd1-2Tokyo Univ. (Dr. Sugiyama)Temperature sensitive At4g33495EMSNo14522871  16407439HomozygousLer
psi00027rgd3-1Tokyo Univ. (Dr. Sugiyama)Temperature sensitive At3g54280EMSNo14522871  19054368HomozygousLer
psi00028ugt89c1-1RIKEN PSC (Dr. Saito)Altered metabolism of flavonoids At1g06000T-DNA insertionYes17314094HomozygousColSALK_068559
psi00029ugt89c1-2RIKEN PSC (Dr. Saito)Altered metabolism of flavonoids At1g06000T-DNA insertionYes17314094HomozygousColSALK_071113
psi00030ugt78d3RIKEN PSC (Dr. Saito)Altered metabolism of flavonoids At5g17030T-DNA insertionYes17314094HomozygousColSALK_114099
psi00034T5004(nced3-1)RIKEN (Dr. Iuchi)Sensitive to drought stress At3g14440T-DNA insertionYes11532178HomozygousCol
psi00035pdh(AtProDH)RIKEN (Dr. Nanjo)Altered metabolism of prolin At3g30775T-DNA insertionYes12773641HomozygousCol
psi00036abi1-1CRIKEN PSC (Dr. Umezawa)Reduced sentivity against ABA At4g26080EMSNo19805022HomozygousCol
psi00038SRK2C-GFP #1RIKEN PSC (Dr. Umezawa)Enhanced drought torelance At1g78290Transformation with GFP fuion proteinYes15561775N/ACol
psi0004135S-AtGolS2-S8RIKEN PSC (Dr. Taji)Enhanced stress torerance At1g56600Over expressionYes11846875N/ACol
psi0004235S-AtGolS2-S29RIKEN PSC (Dr. Taji)Enhanced stress torerance At1g56600Over expressionYes11846875N/ACol
psi00043wav3-1Niigata Univ. (Dr. Sakai)Enhanced root gravitropism At5g49665EMSNo22122664HomozygousLer
psi00044ark1-3Niigata Univ. (Dr. Sakai)Wavy and branched root hair At3g54870EMSNo17971038HomozygousLer
psi00045wav2-1Niigata Univ. (Dr. Sakai)Short pitch wavy growth At5g20520EMSNo15659627HomozygousLer
psi00046wav2-2Niigata Univ. (Dr. Sakai)Short pitch wavy growth At5g20520T-DNA insertionYes15659627HomozygousWs
psi00047wav3-2Niigata Univ. (Dr. Sakai)Enhanced root gravitropic response At5g49665T-DNA insertionYes22122664HomozygousCol
psi00048wav2-1/wav3-1Niigata Univ. (Dr. Sakai)Enhanced short pitch wavy growth At5g49665   At5g20520Crossing (EMS)No22122664HomozygousLer
psi00049wavh1-1Niigata Univ. (Dr. Sakai)None At2g22680T-DNA insertionYes22122664HomozygousColSALK_041291
psi00050wavh1-2Niigata Univ. (Dr. Sakai)None At2g22680T-DNA insertionYes22122664HomozygousColSALK_149664
psi00051wavh2-1Niigata Univ. (Dr. Sakai)None At5g65683T-DNA insertionYes22122664HomozygousColSALK_079902
psi00052wavh2-2Niigata Univ. (Dr. Sakai)None At5g65683T-DNA insertionYes22122664HomozygousColSALK_085354
psi00053wav3-2/wavh1-1Niigata Univ. (Dr. Sakai)Enhanced root gravitropic response At5g49665   At2g22680CrossingYes22122664HomozygousCol
psi00054wav3-2/ wavh2-1Niigata Univ. (Dr. Sakai)Loss of wavy growth/abnormal root gravitropic response At5g49665   At5g65683CrossingYes22122664HomozygousCol
psi00055wavh1-1/ wavh2-1Niigata Univ. (Dr. Sakai)Slight decrease in a gravitropic response At2g22680   At5g65683CrossingYes22122664HomozygousCol
psi00056wav3-1/wavh1-1/wavh2-1Niigata Univ. (Dr. Sakai)N/A At5g49665   At2g22680   At5g65683CrossingYes22122664HomozygousLer/ColEstablished by crossing EMS mutant with T-DNA mutant
psi00057wav3-2/wavh1-1/wavh2-1Niigata Univ. (Dr. Sakai)Loss of wavy growth and root gravitropic response At5g49665   At2g22680   At5g65683CrossingYes22122664HomozygousCol
psi00058wav3-2/wavh1-2/wavh2-1Niigata Univ. (Dr. Sakai)N/A At5g49665   At2g22680   At5g65683CrossingYes22122664HomozygousCol
psi00059wav3-2/wavh1-1/wavh2-2Niigata Univ. (Dr. Sakai)Loss of wavy growth and root gravitropic response At5g49665   At2g22680   At5g65683CrossingYes22122664HomozygousCol
psi00061mrh2-1/ark1-1Niigata Univ. (Dr. Sakai)Wavy and branched root hair At3g54870T-DNA insertionYes17971038HomozygousColSALK_035063
psi00062mrh2-2/ark1-2Niigata Univ. (Dr. Sakai)Wavy and branched root hair At3g54870T-DNA insertionYes17971038HomozygousColSALK_081412
psi00063ark2-1Niigata Univ. (Dr. Sakai)Slightly short root hairs At1g01950T-DNA insertionYes17971038HomozygousColSALK_124908
psi00064ark2-3Niigata Univ. (Dr. Sakai)Slightly short root hairs At1g01950T-DNA insertionYes17971038HomozygousColSALK_035398
psi00065ark2-4Niigata Univ. (Dr. Sakai)Slightly short root hairs At1g01950T-DNA insertionYes17971038HomozygousColSALK_136967
psi00066ark2-2Niigata Univ. (Dr. Sakai)Slightly short root hairs At1g01950Ds insertionYes17971038HomozygousNossenpst12405
psi00067ark3-1Niigata Univ. (Dr. Sakai)Slightly short root hairs At1g12430T-DNA insertionYes17971038HomozygousColSALK_055568
psi00068ark3-2Niigata Univ. (Dr. Sakai)Slight decrease in a gravitropic response At1g12430T-DNA insertionYes17971038HomozygousColSALK_002249
psi00069nek6-1Niigata Univ. (Dr. Sakai)Altered epidermal-cell morphologies At3g44200T-DNA insertionYes17971038HomozygousColSALK_152782
psi00070nek6-2Niigata Univ. (Dr. Sakai)Altered epidermal-cell morphologies At3g44200T-DNA insertionYes17971038HomozygousWsFLAG_397A06
psi00071ark1-1/ark2-1Niigata Univ. (Dr. Sakai)Wavy and branched root hair At3g54870   At1g01950CrossingYes17971038HomozygousColDouble KO
psi00072ark1-1/ark3-1Niigata Univ. (Dr. Sakai)Wavy and branched root hair At3g54870   At1g12430CrossingYes17971038HomozygousColDouble KO
psi00073ark1-1/ark2-1/ark3-1Niigata Univ. (Dr. Sakai)Wavy and branched root hair At3g54870   At1g01950   At1g12430CrossingYes17971038HomozygousColTriple KO
psi00077ARK1pro:GUS in ColNiigata Univ. (Dr. Sakai)GUS expression at root hair forming cells and etc. At3g54870Transformation with GUSYes17971038N/AColT4 seeds
psi00078ARK2pro:GUS in ColNiigata Univ. (Dr. Sakai)GUS expression atimmature leaves and etc. At1g01950Transformation with GUSYes17971038N/AColT4 seeds
psi00079ARK3pro:GUS in ColNiigata Univ. (Dr. Sakai)GUS expression at leaf tissues and etc. At1g12430Transformation with GUSYes17971038N/AColT4 seeds
psi00080WAV2pro::WAV2-GFP in wav2-1Niigata Univ. (Dr. Sakai)GFP expression at root tip and stele At5g20520Transformation of wav2-1 with WAV2-GFPYes15659627N/ALerT4 seeds
psi00081pSLJAct-YC3.60Nara Institute of Science and Technology (Dr. Iwano)Fluorescence in pollen tubes observedN/ATransformation with YC3.60Yes19474213HomozygousCol
psi00082cepr1-1 cepr2-1Nagoya Univ. (Dr. Matsubayashi)Growth retardation accompanied with N-deficiency symptoms At5g49660   At1g72180CrossingYes25324386HomozygousNossenDouble KO
psi00083cepr1-1Nagoya Univ. (Dr. Matsubayashi)Weaker phynotype comparing with psi00082 At5g49660Ds insertionYes25324386HomozygousNossenpst11057
psi00084cepr2-1Nagoya Univ. (Dr. Matsubayashi)Much weaker phenotype comparing with psi00082 At1g72180Ds insertionYes25324386HomozygousNossenpst18898